Publications

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Journals | Conferences | Books/Book Chapters | Publications (non-peer-reviewed) | Theses

Journals

Title: I/NI-calls for the exclusion of non-informative genes: a highly effective feature filtering tool for microarray data
Author(s): Willem Talloen, Djork-Arné Clevert, Sepp Hochreiter, Dhammika Amaratunga, Luc Bijnens, Stefan Kass, Hinrich W.H. Göhlmann
Published: Bioinformatics 2007, 23(21): 2897-2902
doi:10.1093/bioinformatics/btm478
Abstract: HTML
Software: FARMS
 
Title: Fast Model-based Protein Homology Detection without Alignment
Author(s): Sepp Hochreiter, Martin Heusel, Klaus Obermayer
Published: Bioinformatics 2007 23(14):1728-1736
doi:10.1093/bioinformatics/btm247
Abstract: HTML
Software: LSTM protein
 
Title: A compendium of fuzzy weak orders: representations and constructions
Author(s): Ulrich Bodenhofer, Bernard De Baets, Janos Fodor
Published: Fuzzy Sets and Systems, 158(8):811829, 2007
doi:10.1016/j.fss.2006.10.005
 
Title: Special Issue on Soft Computing for Information Mining
Editor(s): Ulrich Bodenhofer, Eyke Hüllermeier, Frank Klawonn, Rudolf Kruse
Published: Soft Computing, 11(5):397494, 2007
doi:10.1007/s00500-006-0105-3



Conferences

Title: Optimality of LSTD and its Relation to MC
Author(s): Steffen Grünewälder, Sepp Hochreiter, Klaus Obermayer
Published: Proceedings of the International Joint Conference on Neural Networks, IJCNN 2007, Orlando, Florida, August 2007, pp. 338-343
Download: PDF
 
Title: A plea for the usefulness of the deductive interpretation of fuzzy rules in engineering applications
Author(s): Ulrich Bodenhofer, Martina Dankova, Martin Stepnicka, Vilem Novak
Published: Proc. 16th IEEE Int. Conf. on Fuzzy Systems, pp. 15671572, London, July 2007. ISBN 1-4244-1210-2; doi:10.1109/FUZZY.2007.4295600
 
Title: Valverde-style representation results in a graded framework
Author(s): Libor Behounek, Ulrich Bodenhofer, Petr Cintula
Published: Proc. 5th Conf. of the European Society for Fuzzy Logic and Technology, volume I, pp. 153160, Ostrava, September 2007. ISBN 978-80-7368-386-3
Download: PDF
 
Title: Towards robust rank correlation measures for numerical observations on the basis of fuzzy orderings
Author(s): Ulrich Bodenhofer, Frank Klawonn
Published: Proc. 5th Conf. of the European Society for Fuzzy Logic and Technology, volume I, pp. 321327, Ostrava, September 2007. ISBN 978-80-7368-386-3
Download: PDF
 



Books/Book Chapters

Title: Monaural Speech Separation by Support Vector Machines: Bridging the Divide Between Unsupervised and Supervised Learning Methods
Author(s): Sepp Hochreiter, Michael C. Mozer
Editor(s): Shoji Makino, Te-Won Lee, Hiroshi Sawada
Published: Blind Speech Separation, Springer, September 2007, pp. 405-421, [ISBN 978-1-4020-6478-4]
 
Title: Bioinformatics Research and Development
First International Conference, BIRD 2007, Berlin, Germany, March 2007
Proceedings
Editor(s): Sepp Hochreiter, Roland Wagner
Published: Springer-Verlag, Berlin Heidelberg, 2007, Lecture Notes in Computer Science, Vol. 4414, Sublibrary: Lecture Notes in Bioinformatics. [ISBN: 978-3-540-71232-9]
 
Title: BIRD’07 - 1st International Conference on Bioinformatics Research and Development
Berlin, Germany, March 12-14, 2007
Editor(s): Sepp Hochreiter, Josef Küng, Jürgen Palkoska, Roland Wagner
Published: Schriftenreihe books@ocg.at, Band 217, OCG, Österreichische Computergesellschaft, Wien, 2007. [ISBN: 978-3-85403-217-5]
 
Title: New Dimensions in Fuzzy Logic and Related Technologies. Proceedings of the 5th EUSFLAT Conference
Editor(s): Martin Stepnicka, Vilem Novak, Ulrich Bodenhofer
Published: University of Ostrava, 2007. [Vol. I: ISBN 978-80-7368-386-3], 480 pages. [Vol. II: ISBN 978-80-7368-387-0], 488 pages
Download: EUSFLAT 2007 Proceedings
 



Publications (non-peer-reviewed)

Title: FARMS: a probabilistic latent variable model for summarizing Affymetrix array data at probe level
Author(s): Djork-Arné Clevert, Sepp Hochreiter
Published: Poster at 15th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), Vienna, Austria, July 21-25 2007
Abstract: PDF
Software: FARMS
 
Title: I/NI-calls: a novel unsupervised feature selection criterion
Author(s): Djork-Arné Clevert, Willem Talloen, Hinrich W.H. Göhlmann, Sepp Hochreiter
Published: Poster at 15th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), Vienna, Austria, July 21-25 2007
Abstract: PDF
Software: FARMS
 
Title: Fast and Precise Remote Homology Detection
Author(s): Martin Heusel, Sepp Hochreiter
Published: Poster at 15th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), Vienna, Austria, July 21-25 2007 (Outstanding Poster Award)
Abstract: PDF (Paper: HTML)
Software: LSTM protein



Theses