| Title: |
APCluster: an R package for affinity propagation clustering |
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| Author(s): |
Ulrich Bodenhofer, Andreas Kothmeier, Sepp Hochreiter |
| Published: |
Bioinformatics, 27(17):2463-2464, July 2011, doi:10.1093/bioinformatics/btr406 |
| Download: |
PDF |
| Software: |
APCluster
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| Title: |
Complex networks govern coiled coil oligomerization - Predicting and profiling by means of a machine learning approach |
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| Author(s): |
Carsten C. Mahrenholz, Ingrid Abfalter, Ulrich Bodenhofer, Rudolf Volkmer, Sepp Hochreiter |
| Published: |
Mol Cell Proteomics, May 2011, doi: 10.1074/mcp.M110.004994 |
| Download: |
PDF
|
| Title: |
cn.FARMS: a latent variable model to detect copy number variations in microarray data with a low false discovery rate |
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| Author(s): |
Djork-Arné Clevert, Andreas Mitterecker, Andreas Mayr, Günter Klambauer, Marianne Tuefferd, An De Bondt, Willem Talloen, Hinrich Göhlmann, Sepp Hochreiter |
| Published: |
Nucl. Acids Res., 39(12):e79, 2011, doi:10.1093/nar/GKR197 |
| Download: |
PDF |
| Software: |
cn.farms |
| Title: |
An analysis pipeline for detecting copy number variations with a low false discovery rate in microarray data |
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| Author(s): |
Djork-Arné Clevert, Andreas Mitterecker, Andreas Mayr, Günter Klambauer, Marianne Tuefferd, An De Bondt, Willem Talloen, Hinrich Göhlmann, Sepp Hochreiter |
| Published: |
12th International Congress of Human Genetics and the American Society of Human Genetics (ICHG/ASHG 2011), Montreal, Canada, Oct 11-15 2011 |
| Abstract: |
PDF
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| Title: |
Accurate detection of copy number variations in next generation sequencing data by a latent variable model |
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| Author(s): |
Günter Klambauer, Djork-Arné Clevert, Andreas Mayr, Karin Schwarzbauer, Andreas Mitterecker, Sepp Hochreiter |
| Published: |
12th International Congress of Human Genetics and the American Society of Human Genetics (ICHG/ASHG 2011), Montreal, Canada, Oct 11-15 2011 |
| Abstract: |
PDF
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| Title: |
Copy number aberrations affecting adhesion genes involved in the development of the cerebellar vermis are associated with autism spectrum disorders |
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| Author(s): |
Sepp Hochreiter, Djork-Arné Clevert |
| Published: |
12th International Congress of Human Genetics and the American Society of Human Genetics (ICHG/ASHG 2011), Montreal, Canada, Oct 11-15 2011 |
| Abstract: |
PDF
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| Title: |
Controlling the false discovery rate at detection of biological aberrations in -omic data |
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| Author(s): |
Djork-Arné Clevert, Andreas Mayr, Andreas Mitterecker, Günter Klambauer, Sepp Hochreiter |
| Published: |
CAMDA 2011, Satellite Meeting of ISMB/ECCB 2011, Vienna, July 15-16, 2011 |
| Abstract: |
PDF |
| Title: |
cn.MOPS: mixture of Poissons for discovering copy number variations in next generation sequencing data |
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| Author(s): |
Günter Klambauer, Djork-Arné Clevert, Sepp Hochreiter
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| Published: |
Poster at 12th International Meeting on Human Genome Variation and Complex Genome Analysis (HGV 2011), San Francisco, USA, Sep 8-10 2011
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| Abstract: |
PDF
|
| Title: |
Copy Number Aberrations Affecting the Developing Cerebellar Vermis are Associated with Autism Spectrum Disorders |
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| Author(s): |
Sepp Hochreiter, Djork-Arné Clevert
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| Published: |
Poster at 12th International Meeting on Human Genome Variation and Complex Genome Analysis (HGV 2011), San Francisco, USA, Sep 8-10 2011
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| Abstract: |
PDF
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| Title: |
A low false discovery rate at detection of copy-number aberrations in microarray data |
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| Author(s): |
Djork-Arné Clevert, Andreas Mayr, Andreas Mitterecker, Günter Klambauer, Sepp Hochreiter
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| Published: |
Poster at 12th International Meeting on Human Genome Variation and Complex Genome Analysis (HGV 2011), San Francisco, USA, Sep 8-10 2011
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| Abstract: |
PDF
|
| Title: |
Detecting rare copy number variations (CNVs) with sparse coding |
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| Author(s): |
Andreas Mitterecker, Djork-Arné Clevert, Andreas Mayr, An De Bondt, Willem Talloen, Hinrich Göhlmann, Sepp Hochreiter |
| Published: |
Poster at 19th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Vienna, Austria, July 17 - July 19 2011
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| Title: |
Collaborative action between Spain and Austria to enhance the application of High Performance Computing to High throughput technologies |
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| Author(s): |
Pau Corral, Noura Chelbat, Antonio Muñoz, Johan Karlsson, Alfredo Martínez, Günter Klambauer, Sepp Hochreiter, Oswaldo Trelles, Ulrich Bodenhofer |
| Published: |
Poster at 19th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Vienna, Austria, July 17 - July 19 2011
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| Title: |
Genome-wide chromatin remodeling at G/C-rich long nucleosome-free regions containing SP1 and MAZ binding sites |
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| Author(s): |
Karin Schwarzbauer , Ulrich Bodenhofer, Sepp Hochreiter |
| Published: |
Poster at 19th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Vienna, Austria, July 17 - July 19 2011
|
| Title: |
cn.FARMS: a latent variable model to detect copy number variations in microarray data with a low false discovery rate |
|
| Author(s): |
Djork-Arné Clevert, Andreas Mitterecker, Andreas Mayr, Günter Klambauer, Marianne Tuefferd, An De Bondt, Willem Talloen, Hinrich Göhlmann, Sepp Hochreiter |
| Published: |
Poster at 19th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Vienna, Austria, July 17 - July 19 2011
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| Title: |
Possible sources of wrongly performing probes: from oligonucleotides arrays to NGS |
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| Author(s): |
Noura Chelbat, Sepp Hochreiter, Ulrich Bodenhofer |
| Published: |
Poster at 19th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Vienna, Austria, July 17 - July 19 2011
|
| Title: |
cn.MOPS: Mixture of Poissons for Discovering Copy Number Variations in Next Generation Sequencing Data |
|
| Author(s): |
Günter Klambauer, Sepp Hochreiter, Karin Schwarzbauer, Andreas Mayr, Djork-Arné Clevert |
| Published: |
Poster at 19th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Vienna, Austria, July 17 - July 19 2011
|
| Title: |
Complex networks govern coiled coil oligomerization - predicting and profiling by means of a machine learning approach |
|
| Author(s): |
Ulrich Bodenhofer, Carsten Mahrenholz, Ingrid Abfalter, Rudolf Volkmer, Sepp Hochreiter |
| Published: |
Poster at 19th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Vienna, Austria, July 17 - July 19 2011
|
| Title: |
Detection of nonlinear effects in gene expression pathways |
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| Author(s): |
Andreas Mayr, Djork-Arné Clevert, Sepp Hochreiter |
| Published: |
Poster at 19th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Vienna, Austria, July 17 - July 19 2011
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| Title: |
FABIA: Factor Analysis for Bicluster Acquisition |
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| Author(s): |
Djork-Arné Clevert, Ulrich Bodenhofer, Martin Heusel, Andreas Mayr, Andreas Mitterecker, Adetayo Kasim, Tatsiana Khamiakova, Suzy Van Sanden, Dan Lin, Willem Talloen, Luc Bijnens, Hinrich Göhlmann, Ziv Shkedy, Sepp Hochreiter |
| Published: |
Poster at 19th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Vienna, Austria, July 17 - July 19 2011 |
