Publications

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Journals | Conferences | Books/Book Chapters | Publications (non-peer-reviewed) | Theses

Journals

Title: Continuity issues of the implicational interpretation of fuzzy rules
Author(s): Martin Stepnicka, Ulrich Bodenhofer, Martina Dankova, Vilem Novak
Published: Fuzzy Sets and Systems, 161(14):1959-1972, 2010
Download: doi:10.1016/j.fss.2010.03.009
 
Title: Filtering data from high-throughput experiments based on measurement reliability
Author(s): Willem Talloen, Sepp Hochreiter, Luc Bijnens, Adetayo Kasim, Ziv Shkedy, Dhammika Amaratunga, Hinrich W.H. Göhlmann
Published: National Academy of Sciences of the United States of America, 107(46): E173-E174, 2010
doi:10.1073/pnas.1010604107
Download: PDF
 
Title: FABIA: Factor Analysis for Bicluster Acquisition
Author(s): Sepp Hochreiter, Ulrich Bodenhofer, Martin Heusel, Andreas Mayr, Andreas Mitterecker, Adetayo Kasim, Tatsiana Khamiakova, Suzy Van Sanden, Dan Lin, Willem Talloen, Luc Bijnens, Hinrich H.W. Göhlmann, Ziv Shkedy, Djork-Arné Clevert
Published: Bioinformatics, 26(12):1520-1527, 2010
doi:10.1093/bioinformatics/btq227 (PDF, 2.5 MB)
Abstract: HTML
Supplementary
material:
PDF (11 MB)
Software: FABIA
 
Title: Ten Simple Rules for Organizing a Virtual Conference Anywhere
Author(s): Nelson N. Gichora, Segun A. Fatumo, Mtakai V. Ngara, Noura Chelbat, Kavisha Ramdayal, Kenneth B. Opap, Geoffrey H. Siwo, Marion O. Adebiyi, Amina El Gonnouni, Denis Zofou, Amal A. M. Maurady, Ezekiel F. Adebiyi, Etienne P. de Villiers, Daniel K. Masiga, Jeffrey W. Bizzaro, Prashanth Suravajhala, Sheila C. Ommeh, Winston Hide
Published: PLoS Comput Biol 6(2): e1000650, 2010. doi:10.1371/journal.pcbi.1000650
 
Title: Informative or Noninformative Calls for Gene Expression: A Latent Variable Approach
Author(s): Adetayo Kasim, Dan Lin, Suzy Van Sanden, Djork-Arné Clevert, Luc Bijnens, Hinrich Göhlmann, Dhammika Amaratunga, Sepp Hochreiter, Ziv Shkedy, Willem Talloen
Published: Statistical Applications in Genetics and Molecular Biology, Vol. 9(1), Article 4, 2010. doi: 10.2202/1544-6115.1460
Download: PDF
 



Conferences

Title: On a graded notion of t-norm and dominance
Author(s): Libor Behounek, Petr Cintula, Ulrich Bodenhofer, Susanne Saminger-Platz, Peter Sarkoci
Published: Proc. 40th IEEE Int. Symp. on Multiple-Valued Logic, pp. 73-78. IEEE Computer Society, 2010
doi: 10.1109/ISMVL.2010.21



Books/Book Chapters



Publications (non-peer-reviewed)

Title: Decoding Sequence Classification Models for Acquiring New Biological Insights
Author(s): Ulrich Bodenhofer, Andreas Kothmeier, Ingrid Abfalter, Carsten Mahrenholz, Sepp Hochreiter
Published: Poster at 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, MA USA, July 11 - July 13 2010
Download: Abstract
 
Title: Identification of non reliable probes on customized Affymetrix Mouse430_2 platform
Author(s): Noura Chelbat, Adetayo Kasim, Ulrich Bodenhofer, Willem Talloen, Sepp Hochreiter, Ziv Shkedy
Published: Poster at 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, MA USA, July 11 - July 13 2010
Download: Abstract (PDF) - Poster (PDF)
 
Title: cn.FARMS: a probabilistic model to detect DNA copy numbers
Author(s): Djork-Arné Clevert, Andreas Mitterecker, Andreas Mayr, Robert Burger, An de Bondt, Marianne Tuefferd, Willem Talloen, Hinrich Göhlmann, Sepp Hochreiter
Published: Poster at 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, MA USA, July 11 - July 13 2010
Download: Abstract
 
Title: FABIA: Factor Analysis for Bicluster Acquisition
Author(s): Sepp Hochreiter, Ulrich Bodenhofer, Martin Heusel, Andreas Mayr, Andreas Mitterecker, Adetayo Kasim, Tatsiana Khamiakova, Suzy Van Sanden, Dan Lin, Willem Talloen, Luc Bijnens, Hinrich W.H. Göhlmann, Ziv Shkedy, Djork-Arné Clevert
Published: Poster at 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, MA USA, July 11 - July 13 2010
Download: Abstract (PDF) - Poster (PDF)
 
Title: A Normalization Technique for Next Generation Sequencing Experiments
Author(s): Günter Klambauer, Karin Schwarzbauer, Andreas Mayr, Sepp Hochreiter
Published: Poster at 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, MA USA, July 11 - July 13 2010
Download: Abstract
 
Title: PrOCoil - Advances in Predicting Two- and Three-stranded Coiled Coils
Author(s): Carsten Mahrenholz, Ingrid Abfalter, Ulrich Bodenhofer, Rudolf Volkmer, Sepp Hochreiter
Published: Poster at 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, MA USA, July 11 - July 13 2010
Download: Abstract
 
Title: Detection of Nonlinear Effects in Gene Expression Pathways
Author(s): Andreas Mayr, Djork-Arné Clevert, Sepp Hochreiter
Published: Poster at 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, MA USA, July 11 - July 13 2010
Download: Abstract
 
Title: Detecting rare copy number variations (CNVs) with sparse coding
Author(s): Andreas Mitterecker, Djork-Arné Clevert, Andreas Mayr, An De Bondt, Willem Talloen, Hinrich Göhlmann, Sepp Hochreiter
Published: Poster at 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, MA USA, July 11 - July 13 2010
Download: Abstract (PDF) - Poster (PDF)
 
Title: Identifying Copy Number Variations based on Next Generation Sequencing Data by a Mixture of Poisson Model
Author(s): Karin Schwarzbauer, Günter Klambauer, Andreas Mayr, Sepp Hochreiter
Published: Poster at 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, MA USA, July 11 - July 13 2010
Download: Abstract
 



Theses